[Bioperl-l] Is there a "combine" method that would combine several sequence alignments to a single alignment?

Roy Chaudhuri roy.chaudhuri at gmail.com
Mon Nov 21 11:41:09 UTC 2011


See the cat method in Bio::Align::Utilities:

http://search.cpan.org/~cjfields/BioPerl-1.6.901/Bio/Align/Utilities.pm#cat

On 21/11/2011 09:58, Dave Messina wrote:
> Hi,
>
> No, I don't believe such a method exists. Could you describe what you are
> wanting to do? Perhaps there is another way to do it.
>
>
> Dave
>
>
>
> On Mon, Nov 21, 2011 at 06:17, Tao Zhu<tzhu at mail.bnu.edu.cn>  wrote:
>
>> I can use the "slice" method to split a single sequence alignment into
>> several subalignments. Then is there a corresponding "combine" method to
>> combine such subalignments back?
>>
>> --
>> Tao Zhu, College of Life Sciences, Beijing Normal University, Beijing
>> 100875, China
>> Email: tzhu at mail.bnu.edu.cn
>>
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