[Bioperl-l] Clean handling of SQLite choice when running ./Build test

[Chris Fields]

I added some simple code to the tests to catch this (on the master branch).  Seems to work; Scott, can you confirm that?

chris

On Apr 12, 2011, at 8:38 AM, Scott Cain wrote:

> Hi Lincoln and Chris,
> 
> I'm wondering what we should do about the SQLite option for testing
> when running ./Build test.  Currently (for me at least :-) when I
> select SQLite as the testing database when running perl Build.PL, the
> Bio::DB::GFF tests get "dubious" (which is fairly amazing, since there
> isn't a SQLite adaptor for Bio::DB::GFF), but it runs a different
> number of tests that planned, thus the dubious.  My inclination would
> be to not include SQLite as a testing option to avoid this problem,
> otherwise I suppose the Bio::DB::GFF test could be modified to use the
> memory adaptor when SQLite is the chosen testing database.
> 
> Scott
> 
> 
> -- 
> ------------------------------------------------------------------------
> Scott Cain, Ph. D.                                   scott at scottcain dot net
> GMOD Coordinator (http://gmod.org/)                     216-392-3087
> Ontario Institute for Cancer Research
> 
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