[Bioperl-l] How to extract corresponding human genome sequence using mouse genome coordination
Chris Fields
cjfields at illinois.edu
Tue Jul 27 16:55:26 UTC 2010
Look at the ensembl API for this (I think compara in particular).
chris
On Jul 25, 2010, at 8:56 AM, ncRNA wrote:
> Hi all,
>
> I am new to this forum and bioperl. I have a list of mouse genomic
> regions and would like to get the "corresponding" human genomic
> sequences, which can be seen from the comparative genomics tracks in
> the UCSC genome browser. Does anyone have any clue on how to realize
> this?
>
> Thanks in advance,
> ncRNA
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