[Bioperl-l] Mapping Blast results

[Scott Cain]

Hi Shalabh,

When you say it's not working, what do you mean?  Presumably, you
could write a script that uses Bio::DB::SeqFeature::Store if speed is
the problem, but if you wanted to go that far, your time would
probably be better spent installing GBrowse.

Scott


On Tue, Feb 2, 2010 at 10:16 AM, shalabh sharma
<shalabh.sharma7 at gmail.com> wrote:
> Hi,
>    I am trying to map blast results on a gene. I am using Bio::Graphics
>    http://bioperl.org/wiki/HOWTO:Graphics
>
> This is working fine for small blast files but not for large blast file with
> lot of hits. Is there any way i can use this for large blast files?
>
> Thanks
> Shalabh
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l
>



-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   scott at scottcain dot net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research