[Bioperl-l] Regarding Bio::TreeIO Object

Roy Chaudhuri roy.chaudhuri at gmail.com
Tue Nov 17 11:24:07 UTC 2009


Hi Aneesh,

Please keep your replies on the mailing list, that way someone else can 
respond, which would be particularly useful in this case since I know 
nothing about MapIO.

Roy.

Aneesh K wrote:
> Thanks for your reply. 
> 
> I would like to know about "Genetic Maps" also. I would like to 
> use MapIO object. 
> But I'm not aware about genetic maps and the mapmaker format. 
> 
> Please tell me from where I can get some examples for mapmaker format 
> and some example scripts to use MapIO object. 
> 
> Hoping your reply.
> 
> Aneesh.K
> Mob. 09646181517
> 
> 
> 
> On Mon, Nov 16, 2009 at 11:01 PM, Roy Chaudhuri <roy.chaudhuri at gmail.com 
> <mailto:roy.chaudhuri at gmail.com>> wrote:
> 
>     Hi Aneesh,
> 
>     See the Bioperl trees howto:
>     http://www.bioperl.org/wiki/HOWTO:Trees
> 
>     Roy.
> 
> 
>     Aneesh K wrote:
> 
>         Hi,
> 
>         I just started to use Bioperl modules. It's really useful and
>         interesting.
>         Now I have in stuck with "Tree objects and phylogenetic trees".
>         I couldn't get any documentation/examples about reading/parsing
>         phylip tree
>         files.
> 
>         Please tell me from where I can get some sample codes for this.
> 
>         Waiting for your reply.
> 
>         Thanks
>         Aneesh.K
>         Mob. 09646181517
> 
> 
> 
>     -- 
>     Dr. Roy Chaudhuri
>     Department of Veterinary Medicine
>     University of Cambridge, U.K.
> 
> 




More information about the Bioperl-l mailing list