[Bioperl-l] Random nucleotide string generator?
Aidan Budd
budd at embl-heidelberg.de
Fri Jun 26 08:30:12 UTC 2009
a non-bioperl option would be to use something external like seq-gen or
similar - tools designed for outputing "random" sequences simulated over a
tree - one could simply sample a single simulated sequence at random from
the output alignment
On Fri, 26 Jun 2009, Roger Hall wrote:
> All,
> Is there a random generator for creating nucleotides (of length l with
> composition frequencies a, c, g, and t) in there somewhere?
>
> I noticed a thread about it from 2000 and nothing since (searching for "random sequence").
>
> If not - what should the namespace be for such a module should it be undone and desirable?
>
> TIA!
>
> Roger
>
>
>
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Aidan Budd tel:+49 (0)6221 387 8530
EMBL - European Molecular Biology Laboratory fax:+49 (0)6221 387 8517
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