[Bioperl-l] Extreme newbie question.
Adlai Burman
adlai at refenestration.com
Thu Jun 25 02:08:31 UTC 2009
I have been trying to install BioPerl for a while now and after
pummeling my hard drive (Mac OS 10.5 intel) with several attempts at
Fink installation, a >cpan installation and removing my .cpan folder I
am still at square 0. I do not want to do anymore damage to my
computer, yet I really need a working install (especially to interface
with remote DBs like GenBank. Can anyone give me some advice here?
After each attempt, I have tried to run perldoc bptutorial.pl and
tried test scripts with "use Bio::Perl" in the headers and I just
receive error mesages like the following:
Can't locate Bio/Perl.pm in @INC (@INC contains: /home/users/dag/lib/
perl5/ /Library/Perl/Updates/5.8.8/darwin-thread-multi-2level /Library/
Perl/Updates/5.8.8 /System/Library/Perl/5.8.8/darwin-thread-
multi-2level /System/Library/Perl/5.8.8 /Library/Perl/5.8.8/darwin-
thread-multi-2level /Library/Perl/5.8.8 /Library/Perl /Network/Library/
Perl/5.8.8/darwin-thread-multi-2level /Network/Library/Perl/5.8.8 /
Network/Library/Perl /System/Library/Perl/Extras/5.8.8/darwin-thread-
multi-2level /System/Library/Perl/Extras/5.8.8 /Library/Perl/5.8.6 /
Library/Perl/5.8.1 .) at trsh.pl line 1.
I have been working from the OReilly book astering Perl for
Bioinformatics and the INSTALL file and have scoured around the
BioPerl website and am still stuck.
Thanks in advance,
Adlai
More information about the Bioperl-l
mailing list