[Bioperl-l] genbank2gff3 for prokaryotes?

[Robert Buels]

Chris Fields wrote:
 > In fact, seeing as we're refactoring GFF and other aspects of Features
 > in bioperl, this may be the best time to add something in.

Reading that thread, it sounds like most of the issues revolve around 
when and how to use the unflattener.  Perhaps just adding another 
command line switch or two to the script would be appropriate?

Editorializing a bit, it's really disheartening that Genbank stores 
features in such a lossy way.

Rob