[Bioperl-l] raw blast report lines from SearchIO

Wiepert, Mathieu Wiepert.Mathieu@mayo.edu
Thu, 10 Oct 2002 07:03:34 -0500


Hi,

Not that I am aware of, but I think that Bio::SearchIO::Writer::TextResultWriter can do a good job of mimicking that.  What were you wanting to do with the output?

-Mat

> -----Original Message-----
> From: Michael Thon [mailto:mrthon@unity.ncsu.edu]
> Sent: Thursday, October 10, 2002 6:38 AM
> To: bioperl-l@bioperl.org
> Subject: [Bioperl-l] raw blast report lines from SearchIO
> 
> 
> Greetings-  Is there a method to return the raw, unparsed 
> lines of a blast
> report Hit or HSP using SearchIO?  Thanks
> Mike THon
> 
> 
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