[Bioperl-l] raw blast report lines from SearchIO

Jason Stajich jason@cgt.mc.duke.edu
Thu, 10 Oct 2002 07:39:02 -0400 (EDT)


I don't think so.

Can you explain what you are trying to do?  I have written
Bio::SearchIO::Writer::TextResultWriter which will reconstitute a blast
report from the Bio::Search objects, it produces output *almost* identical
to a NCBI blast report.

-jason

On Thu, 10 Oct 2002, Michael Thon wrote:

> Greetings-  Is there a method to return the raw, unparsed lines of a blast
> report Hit or HSP using SearchIO?  Thanks
> Mike THon
>
>
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-- 
Jason Stajich
Duke University
jason at cgt.mc.duke.edu