[Biojava-l] Saving back chromatogram?

[Andy Yates]

Hi Umanga,

Unfortunately there is no write feature available in the BioJava API. My
advice would be to store these new basecalls in a separate file & look
into using the Staden IO package which does support write functions (not
sure if it will write into AB1 but it will do SCF & ZTR). Sadly this is
written in C so you will have to write either some glue code with JNI to
get it working or write a small C program to munge an AB1 trace & your
new file together.

Sorry I can't be of any more help,

Andy

Ashika Umanga Umagiliya wrote:
> Greetings all,
> 
> I was able to display chromatogram using ABIFChromatogram class .
> Now what I want to implement is a chromatogram Editor,where user can
> edit base calls and save aback to AB1 files.
> Is there a way to do this in BioJava?
> 
> Best Regards,
> umanga
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