[Biojava-l] parsePDB

[Tamas Horvath]

I have some very plane pdb files (Coordinates only), and if I try to parsethem, it throws:
java.lang.StringIndexOutOfBoundsException: String index out of range: 6    at java.lang.String.substring(String.java:1765)    at org.biojava.bio.structure.io.PDBFileParser.parsePDBFile(PDBFileParser.java:764)    at org.biojava.bio.structure.io.PDBFileParser.parsePDBFile(PDBFileParser.java:720)

What do I need in the pdb file to be able to parse it?