[Biojava-l] Build errors

[Matthew Pocock]

Make sure you have sablecc.jar added to your ant/lib directory - grab 
from sourceforge. Version 3.beta.2 seems to work, 3.beta.1 doesn't.

Matthew

Andy Hammer wrote:

>As some have suggested, I checked the following:
>I have the bytecode.jar file as  shown
>-rwxrwxr-x    1 ahammer  ahammer       91K Jul 28
>08:18 bytecode.jar
>
>My PATH has no old biojava.jar references
>PATH =
>.:/usr/local/bin:/bin:/usr/bin:/usr/X11R6/bin:/home/ahammer/bin:/usr/java/bin:/usr/ant/bin
>Also the java/jre/lib/ext directory is devoid of any
>biojava.jars
>
>I get the errors:
>compile-biojava:
>    [javac] Compiling 1099 source files to
>/home/ahammer/downloads/biojava-live/ant-build/classes/biojava
>    [javac] depend attribute is not supported by the
>modern compiler
>    [javac]
>/home/ahammer/downloads/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:9:
>package org.biojava.ontology.format.triples.lexer does
>not exist
>    [javac] import
>org.biojava.ontology.format.triples.lexer.Lexer;
>    [javac]                                           
>      ^
>    [javac]
>/home/ahammer/downloads/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:10:
>package org.biojava.ontology.format.triples.lexer does
>not exist
>    [javac] import
>org.biojava.ontology.format.triples.lexer.LexerException;
>    [javac]                                           
>      ^
>    [javac]
>/home/ahammer/downloads/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:11:
>package org.biojava.ontology.format.triples.parser
>does not exist
>    [javac] import
>org.biojava.ontology.format.triples.parser.Parser;
>    [javac]                                           
>       ^
>    [javac]
>/home/ahammer/downloads/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:12:
>package org.biojava.ontology.format.triples.parser
>does not exist
>
>. . .
>many more
>. . .
>ending with
>    [javac]
>/home/ahammer/downloads/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:392:
>cannot resolve symbol
>    [javac] symbol  : class ACompoundFullName
>    [javac] location: class
>org.biojava.ontology.io.TriplesParser.Processor
>    [javac]         ACompoundFullName fn =
>(ACompoundFullName) fullName;
>    [javac]         ^
>    [javac]
>/home/ahammer/downloads/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:392:
>cannot resolve symbol
>    [javac] symbol  : class ACompoundFullName
>    [javac] location: class
>org.biojava.ontology.io.TriplesParser.Processor
>    [javac]         ACompoundFullName fn =
>(ACompoundFullName) fullName;
>    [javac]                                 ^
>    [javac]
>/home/ahammer/downloads/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:408:
>cannot resolve symbol
>    [javac] symbol  : class AIntegerLiteralValue
>    [javac] location: class
>org.biojava.ontology.io.TriplesParser.Processor
>    [javac]       if(v instanceof
>AIntegerLiteralValue) {
>    [javac]                       ^
>    [javac] 100 errors
>
>Any suggestions?  
>
>Andy
>
>
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