[Biojava-dev] demo directories not being compiled

[ALESSANDRO AIEZZA (RIT Student)]

Mark = Good Idea!

On Thursday, February 5, 2015, Mark Fortner <phidias51 at gmail.com> wrote:

> You could also build a separate JAR with demo apps.
>
> Cheers,
>
> Mark
>
>
> On Thu, Feb 5, 2015 at 9:31 AM, Andreas Prlic <andreas at sdsc.edu
> <javascript:_e(%7B%7D,'cvml','andreas at sdsc.edu');>> wrote:
>
>> Hi,
>>
>> I mostly excluded them since I did not want to have the demo package name
>> in our release jars... Perhaps we can find a way so they get compiled, but
>> not included in the packaging of the jars...
>>
>> A
>>
>> On Thu, Feb 5, 2015 at 3:18 AM, Spencer Bliven <sbliven at ucsd.edu
>> <javascript:_e(%7B%7D,'cvml','sbliven at ucsd.edu');>> wrote:
>>
>>> I noticed that demo directories are now excluded from maven builds.
>>> While it's true that these aren't needed in the final jar, we should still
>>> make sure that they compile correctly.  For instance, there are currently
>>> some missing imports in
>>> biojava-structure-gui/...demo/DemoAlignmentFromFasta which were being
>>> masked. The exclusion setting also prevents them from being considered
>>> classes in Eclipse, meaning you can't run them, compile them, etc.
>>>
>>> I believe they were excluded from the build because of duplicated
>>> classes between structure and structure-gui modules, as well as to keep the
>>> package names consistent. However, maybe it would be better to rename them
>>> to org.biojava.nbio.module.demo instead?
>>>
>>>
>>> Eclipse workaround:
>>>
>>> Right-click 'src/main/java' > Build Path > Configure Inclusion/exclusion
>>> filters. Delete the exclusion patterns.
>>>
>>>
>>> -Spencer
>>>
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>>>
>>
>>
>>
>>
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>>
>
>
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