[Biojava-dev] GFF3Reader modification

[Scooter Willis]

Ryan

Do you need a feature for debugging faster or trying to avoid reading
everything into memory? Would be great to get performance improvements or
additional features to handle large GTF/GFF3 files. Let me know if I can
do anything to help.

Scooter

On 8/22/12 3:40 PM, "Ryan Golhar" <ngsbioinformatics at gmail.com> wrote:

>Hi all - I'm using the GFF3Reader right now to read in the hg19 GTF file
>from UCSC.  In debugging my own application, loading the GTF file take a
>little bit of time. I'd like to make a modification to read each line on
>demand instead of all at once.  Is this something others would find
>useful?
> If so, I'll submit a patch with my change.
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