[Biojava-dev] biojava SVN

[Andy Yates]

Ah fair enough. So Jmol should be okay so long as we can get the okay from those guys. Forester is a bit harder since there is no official release of that code. However I thought that code base had been committed into our repo.

Andy

On 5 May 2010, at 16:22, Andreas Prlic wrote:

> Hi Andy,
> 
> I am talking about biojava3:  the structure-gui module requires a
> visualization library (Jmol) and  phylo  depends on forester...
> 
> Andreas
> 
> On Wed, May 5, 2010 at 12:59 AM, Andy Yates <ayates at ebi.ac.uk> wrote:
>> Which 3rd party jars? Looking at the dependency list of the core 3rd party dependencies which were not in maven central was 0 (apart from bytecode).
>> 
>> Andy
>> 
>> On 5 May 2010, at 05:38, Andreas Prlic wrote:
>> 
>>>> Right, but that helps only temporarily.  We can't have any non-maven
>>>> central repositories or any non-maven central repo dependencies if you
>>>> want to rsync a local repo to maven central.
>>>> 
>>> 
>>> Ok. Is it at all possible to upload 3rd party jars to the central repo?
>>> 
>>> 
>>>> If we are setting up a local repo, I would recommend installing Nexus.
>>>> 
>>> 
>>> I  will try to talk to the BioMoby guys about what they are using for their
>>> repository...
>>> 
>>> In the meanwhile I started to play around with an biojava specific
>>> repository...
>>> http://www.biojava.org/download/maven/
>>> 
>>> Andreas
>>> _______________________________________________
>>> biojava-dev mailing list
>>> biojava-dev at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/biojava-dev
>> 
>> --
>> Andrew Yates                   Ensembl Genomes Engineer
>> EMBL-EBI                       Tel: +44-(0)1223-492538
>> Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
>> Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/
>> 
>> 
>> 
>> 
>> 
> 
> 
> 
> -- 
> -----------------------------------------------------------------------
> Dr. Andreas Prlic
> Senior Scientist, RCSB PDB Protein Data Bank
> University of California, San Diego
> (+1) 858.246.0526
> -----------------------------------------------------------------------

-- 
Andrew Yates                   Ensembl Genomes Engineer
EMBL-EBI                       Tel: +44-(0)1223-492538
Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/