[Biojava-dev] Hi.. Calling Java from Perl

ayates at ebi.ac.uk ayates at ebi.ac.uk
Wed Jul 29 20:56:34 UTC 2009


That was my original point however it sounds from the original poster that
the system which is in Perl needs to call out to an already implemented
system in BioJava. In a perfect world this mismatch would never happen but
hey we all know it can :)

Andy

> You could always use BioPerl instead :-)
> http://www.bioperl.org/wiki/Main_Page
>
>
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>> -----Original Message-----
>> From: biojava-dev-bounces at lists.open-bio.org [mailto:biojava-dev-
>> bounces at lists.open-bio.org] On Behalf Of Abhishek Pratap
>> Sent: Wednesday, 29 July 2009 7:04 a.m.
>> To: biojava-dev at lists.open-bio.org
>> Subject: [Biojava-dev] Hi.. Calling Java from Perl
>>
>> Hi Guys
>>
>> Before I ask the question, let me introduce myself. I am Abhishek
>> primarily a Bioinformatician and this is my first mail here. I
>> realized sooner thn later that I have to use BioJava to make my life
>> easier. :)
>>
>> So basically we have a lot of perl code where we would like to plugin
>> some Biojava code and some inhouse written packages/classes. I am just
>> wondering what is the best way to do so. Clearly I am not a java guy
>> so please excuse me in case I am asking something which is very basic.
>> I found couple of solutions after few googles but not sure which is
>> the efficient one.
>>
>> Thanks,
>> -Abhi
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