[Biojava-dev] Hi.. Calling Java from Perl

Smithies, Russell Russell.Smithies at agresearch.co.nz
Wed Jul 29 20:25:05 UTC 2009


You could always use BioPerl instead :-)
http://www.bioperl.org/wiki/Main_Page




Russell Smithies 

Bioinformatics Applications Developer 
T +64 3 489 9085 
E  russell.smithies at agresearch.co.nz 

Invermay  Research Centre 
Puddle Alley, 
Mosgiel, 
New Zealand 
T  +64 3 489 3809   
F  +64 3 489 9174  
www.agresearch.co.nz 



> -----Original Message-----
> From: biojava-dev-bounces at lists.open-bio.org [mailto:biojava-dev-
> bounces at lists.open-bio.org] On Behalf Of Abhishek Pratap
> Sent: Wednesday, 29 July 2009 7:04 a.m.
> To: biojava-dev at lists.open-bio.org
> Subject: [Biojava-dev] Hi.. Calling Java from Perl
> 
> Hi Guys
> 
> Before I ask the question, let me introduce myself. I am Abhishek
> primarily a Bioinformatician and this is my first mail here. I
> realized sooner thn later that I have to use BioJava to make my life
> easier. :)
> 
> So basically we have a lot of perl code where we would like to plugin
> some Biojava code and some inhouse written packages/classes. I am just
> wondering what is the best way to do so. Clearly I am not a java guy
> so please excuse me in case I am asking something which is very basic.
> I found couple of solutions after few googles but not sure which is
> the efficient one.
> 
> Thanks,
> -Abhi
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-dev
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