[Biojava-dev] Possible bug in AbstractRichSequenceDB

Richard Holland holland at ebi.ac.uk
Fri Dec 7 11:53:42 UTC 2007


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Definitely a bug. I'll commit a fix once the SVN migration is complete,
to save confusion.

cheers,
Richard

Mark Schreiber wrote:
> Hi -
> 
> Yesterday I noticed a possible bug in HashRichSequenceDB which is
> probably caused by AbstractRichSequenceDB.  The issue is that the
> iterator thinks there are no sequences even when there are.
> 
> I don't have the code base with me but probably when sequences are
> added without an ID no ID is being generated for them and thus the set
> of ID's is empty even though there are sequences present in the DB.
> 
> PS, would have submitted this to bugzilla but the biojava.org seems to be down.
> 
> - Mark
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-dev
> 

- --
Richard Holland (BioMart)
EMBL EBI, Wellcome Trust Genome Campus,
Hinxton, Cambridgeshire CB10 1SD, UK
Tel. +44 (0)1223 494416

http://www.biomart.org/
http://www.biojava.org/
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