[Biojava-dev] SeqIOTools method not found
Dickson S. Guedes
guedes at unisul.br
Wed Mar 22 20:01:15 UTC 2006
Hi Yan,
Download BioJava
- http://biojava.org/wiki/BioJava:Download
Getting Started
- http://biojava.org/wiki/BioJava:GetStarted
Look at the sites above to get information about correct installation of
Biojava framework.
[]s
--
Dickson S. Guedes
/*
* UNISUL - Universidade do Sul de Santa Catarina
* ATI - Assessoria de Tecnologia da Informação
* (0xx48) 621-3200 - http://www.unisul.br
*
* "Quis custodiet ipsos custodes?"
*/
Yan Bai wrotes:
> I am new in this mailing list,
> I've download biojava package, pretty sure CLASSPATH was set up
right. I typed the example given on the tutorial (Trace2Seq.java), got
compiler error as below. In biojava source code, I couldn't find the
method named as "writeFasta" in SeqIOTools with "Sequence" as the 2nd
parameter, neither did I find any methods with 'Sequence' as the 2nd
parameter, but they all show up on API.
> I am in the first step of trying Biojava, and this is frustrating.
Apprecate if someone will help me out.
> -------------------------------------
> Trace2Seq.java:18: cannot find symbol
> symbol : method
writeFasta(java.io.PrintStream,org.biojava.bio.seq.Sequence)
> location: class org.biojava.bio.seq.io.SeqIOTools
> SeqIOTools.writeFasta(System.out, seq);
> ^
> 1 error
> --------------------------------------
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