[Biojava-dev] ProcessTools / ExecRunner

Thomas Down td2 at sanger.ac.uk
Fri Oct 3 05:45:02 EDT 2003


Sorry about the mix up here -- two solutions to the same problem
got checked in within a couple of minutes of one another.  I think
we're going to rationalize on ProcessTools before BioJava 1.4, though.


On Fri, Oct 03, 2003 at 01:43:50PM +1200, Len Trigg wrote:
> 
> Also, he switched to using ProcessTools, and has noticed that
> occasionally a job will just hang (I'm guessing there might be a bug
> in the way ProcessTools extracts the stdout/stderr of the process). If
> it doesn't ring a bell with anyone, I'll look into it.

Have you got any examples of this?

Also, do you know what version of Java is installed?  I believe
that some Process bugs got fixed in JDK1.4.2, so it's probably worth
upgrading if you haven't already.

    Thomas.


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