[Biojava-dev] Problems with parameter change event notificationin profile HMM (2)

Schreiber, Mark mark.schreiber at agresearch.co.nz
Fri Jul 18 11:18:21 EDT 2003


> Change event forwarding was a bit of a mess in the dp package. It's 
> marginaly more readable now. At least my unit tests pass. I 
> think this 
> fix should probably be ported to the 1.3 branch - could somebody say 
> yay/nay? The affected files are:
> 
> dp:
>    MarkovModel
>    SimpleEmissionState
>    SimpleMarkovModel
>    WMAsMM
> utils:
>    AbstractChangeable
>    ChangeForwarder
> 
> and the extra tests are:
> 
> dp:
>    EmissionStateEventTest
>    MarkovModelEventTest
>    EventCounter
> 

They seem to be important, I think they should be rolled into bj1.3,  it
should compile OK, possibly with a few tweaks of any BioError methods
unless bj1.3.1 is going to be JDK1.4 only. Will you also need to port
the new bytecode module to the bj1.3 branch?

- Mark


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