[Biojava-dev] OC/OS/OX field output

[Matthew Pocock]

The taxonomy code is my bad. I wrote it a year and a
half ago - it worked for me TM.  There's no emotional
attachment on my part to the current code or
interfaces. As long as the info round-tripps (we can
write out taxonomy objects as os/oc/ox lines) then go
for it.

I guess we should also be parsing the references into
reference objects. Grrr.

Matthew

 --- Len Trigg <len at reeltwo.com> wrote: > 
> Here's what I've done for getting a Taxon annotation
> to appear when
> you do an embl output. I'm not sure if this is the
> right way to do
> this (it seems like jumping around in a few more
> places than I'd
> expect). I'm not sure when something should belong
> in taxa.EbiFormat
> vs seq.io.OrganismParser. If it looks OK to you guys
> I'll do similar
> stuff to the other formats.
> 
> Cheers,
> Len.
> 
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at biojava.org
> http://biojava.org/mailman/listinfo/biojava-dev 

________________________________________________________________________
Want to chat instantly with your online friends?  Get the FREE Yahoo!
Messenger http://uk.messenger.yahoo.com/