[BioSQL-l] Error in load_ncbi_taxonomy.pl

Peter Cock p.j.a.cock at googlemail.com
Sat Feb 11 23:08:43 UTC 2012


On Sat, Feb 11, 2012 at 10:15 PM, Hilmar Lapp <hlapp at drycafe.net> wrote:
> Indeed. I was thinking that there is a 1.0.2 release that
> includes it, but apparently there isn't.
>

The schema itself should be ready - but what else is needed for
BioSQL on SQLite to be ready for release? Assorted BioSQL
Perl script updates like load_ncbi_taxonomy.pl might need work?

> It appears that bioperl-db (and thus BioPerl) does not support
> the SQlite schema (yet).
>

That would be good, but doesn't need to holdup a BioSQL
release, does it?

Peter



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