[BioSQL-l] Re: gbrowse on top of biosql

Marc Logghe Marc.Logghe at devgen.com
Fri Jan 21 16:12:34 EST 2005


> It is possible. There were even benchmarks run for gbrowse against 
> dbgff, chado, and biosql. Gbrowse will need a special adaptor 
> that was 
> written and tested by Simon at CSHL last year. I'm not sure whether 
> this was included in the last gbrowse release, but the folks at the 
> gbrowse mailing list can probably help you out

I can confirm this. Don't know what is the situation now, but it _used_ to work with version 1.61.

> > have not been successfully as of yet. 

Genevieve, could you elaborate on that ? Do you see error messages ? Is there a problem of configuration ?

Marc





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