[Biopython] Writing a paper about python scripts

[Iddo Friedberg]

Perhaps write the paper as a general software note  and provide the reader
with Jupyter notebooks to run the scripts?

On Thu, Jan 19, 2017 at 5:36 PM, Damian Menning <dmenning at mail.usf.edu>
wrote:

> Hello everyone,
>
>   I just started writing a paper to describe the usage of Python/Biopython
> scripts I wrote to design primers and custom databases specific to groups
> of fish.  I don't want it to be written like a manual but I do want to
> explain the process so that others can use the scripts and repeat the
> process on their own organisms.  My problem is I have never written a paper
> like this and am having a hard time finding papers to use as a general
> guide.  If anyone has any suggestions on papers I could use as a general
> guide I would appreciate it.
>
>   Thank you
>
>   Damian
>
> --
> Damian Menning, Ph.D.
>
> "There are two types of academics. Those who use the Oxford comma, those
> who don't and those who should."
>
> Standard comma - You know Bob, Sue and Greg? They came to my house.
> Oxford comma - You know Bob, Sue, and Greg? They came to my house.
> Walken Comma - You know, Bob, Sue, and Greg? They came, to my house.
> Shatner comma - You, know, Bob, Sue, and Greg? They, came, to my house.
>
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-- 
Iddo Friedberg
http://iddo-friedberg.net/contact.html
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