[Biopython] Using bioPython and bioSQL

Sean Davis sdavis2 at mail.nih.gov
Thu Oct 6 10:51:20 UTC 2011


Hi, Animesh.

How do you want folks to query the database?  Web?  Command-line?  Are
the queries limited in scope or do you want to provide something fully
general?

Sean

On Thu, Oct 6, 2011 at 6:25 AM, Animesh Agrawal
<animesh.agrawal at anu.edu.au> wrote:
> Hi All,I am trying to develop a interface for a local sequence depository in my lab. Using biopython cookbook examples I have been able to populate the database. But to query the database I want to create an interface so all other members in my lab can access it. I have no experience in doing this kind of development. I need some advice on best way of doing it and if there are already developed modules in biopython which can help me in attaining my objectives.
> Cheers
> Animesh
> Animesh Agrawal
> PhD Scholar
> The John Curtin School of Medical Research
> Australian National University
> Canberra, Australia
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