[Biopython] missing dtd in Bio.Entrez

Guy Eakin guyeakin at gmail.com
Wed Jun 1 08:51:13 UTC 2011


Thanks for the help.  I'll upgrade soon. Bio as well as the OS. I am
an infrequent user of linux and biopython so have been doubly lazy.
Guy

On Wed, Jun 1, 2011 at 4:42 AM, Peter Cock <p.j.a.cock at googlemail.com> wrote:
> On Wed, Jun 1, 2011 at 9:33 AM, Guy Eakin <guyeakin at gmail.com> wrote:
>> Well, I suppose that explains it.  version 1.54 is what I am using.  I
>> downloaded it from the Ubuntu software center earlier tonight. I had
>> just assumed that was most recent. Sorry for the red herring.
>>
>> guy
>
> Yes, that makes sense.
>
> If you want a more recent version, uou can probably ask for the latest
> version to be offered on an Ubuntu backport repository - otherwise natty
> has Biopython 1.56 and oneiric has 1.57 according to this:
>
> http://packages.ubuntu.com/search?suite=all&searchon=names&keywords=python-biopython
>
> Alternatively, try:
>
> sudo apt-get remove python-biopython python-biopython-doc python-biopython-sql
> sudo apt-get build-dep python-biopython python-biopython-doc
> python-biopython-sql
>
> and then install from source.
>
> Peter
>




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