[BioPython] development question

Pavel SRB srbanator at heckler-koch.cz
Thu Aug 28 08:06:51 UTC 2008


hi all, please i have a question about your development settings.

example: at my work we keep all code in svn repository. Each developer 
checkout the code, work on it, after every code edit i restart my 
apache-prefork and then see the results in browser, log or whatever.

so now to biopython. On my system i have biopython from debian 
repository via apt-get. But i would like to have second version of 
biopython in system just to check, log and change the code to learn 
more. This can be done with removing 
sys.path.remove("/var/lib/python-support/python2.5")
and importing Bio from some other development directory. But this way i 
loose all modules in direcotory mentioned above and i believe it can be 
done more clearly

so how you are coding your biopython?

thanks for advice

pavel srb




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