[BioPython] os.system problem with clustalw (on Windows)

[Peter]

Emanuel Hey wrote:
> Peter
> 
> both of these now work. 
> 
> faa_filename = 'data.faa'
> cline = MultipleAlignCL(faa_filename)
> align = do_alignment(cline)
>
> faa_filename =
> 'C:\\temp\\pythonplay\\hcgplay\\data.faa'
> cline = MultipleAlignCL(faa_filename)
> align = do_alignment(cline)
> 
> Thanks!
> 
> jhey

Oh good :)

Have you tried file names and/or paths with spaces in them?

Peter