[BioPython] My SeqIO doesn't have a "parse" method!

Italo Maia italo.maia at gmail.com
Wed Jul 25 23:07:49 UTC 2007


Oh well, so i'll try gutsy's biopython debian package. Link :
http://mirrors.kernel.org/ubuntu/pool/universe/p/python-biopython/python-biopython_1.43-1_i386.deb
Thanks Peter.

2007/7/25, Peter <biopython at maubp.freeserve.co.uk>:
>
> Italo Maia wrote:
> > I'm confused! Shouldn't SeqIO have a "parse" method??
> > My ubuntu biopython doesn't. Is this correct?
>
> You need Biopython 1.43 or later to use the new Bio.SeqIO code.
> http://biopython.org/wiki/SeqIO
>
> Which version of Ubuntu do you have? At the moment, only new un-released
> Ubuntu Gutsy has the latest version of Biopython in the repositories:
> http://packages.ubuntu.com/gutsy/source/python-biopython
>
> The good news is that is should be simple to install Biopython from
> source on Ubuntu - provided you install all the dependencies first! I
> personally still use Ubuntu Dapper Drake on my Linux machine.
>
> Peter
>
>


-- 
"A arrogância é a arma dos fracos."

===========================
Italo Moreira Campelo Maia
Ciência da Computação - UECE
Desenvolvedor WEB
Programador Java, Python

Meu blog ^^ http://eusouolobomal.blogspot.com/

===========================




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