[BioPython] Re: [Biopython-dev] streamerror_in_local_blast.py

[Iddo Friedberg]

Could you please provide the entire traceback? It's pretty hard to find
an error without it ;)



Thanks,

./I

kim750 at ggbio.com wrote:
> Hi!
> My name is Yeon-Ki.  I am a novice with biopython.
> Now I am tring to use local_blast.py.  But the moment i typed local_blast.py I have Running blastall...
> Traceback (most recent call last):  and 
> whole bunch of "Bio/Blast/NCBIStandalone.py" errors and SyntaxError: Unexpected end of stream at the end of error message.
> 
> I down-loaded  a current version of  NCBIStandalone.py --> Revision 1.49 / (as text) / (view) - annotate - [select for diffs] , Tue Sep 2 17:47:29 2003 UTC (16 hours, 11 minutes ago) by jchang.  I replaced the old one in the Bio/Blast/NCBIStandalone.py with new one , but still I could not use the local_blast.py.
> 
> Could you help me out?
> 
> Thank you.
> Yeon-Ki
> 
> 
>  
> 
> 
> Yeon-Ki Kim, Ph.D.
> Research Scientist
> 
> GreenGene Biotech, inc.
> Myongji University
> 38-2 Namdong
> Yongin Kyonggido 449-728 Korea
> 
> GreenGene BioTech Inc.
> 
> 
> 
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-- 
Iddo Friedberg, Ph.D.
The Burnham Institute
10901 N. Torrey Pines Rd.
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http://ffas.ljcrf.edu/~iddo