[BioPython] EUtils testing

Cary Miller Cary.Miller@uchsc.edu
Sun, 12 Jan 2003 14:44:39 -0700 (MST)


Hi Andrew,
  While testing EUtils I got this traceback.

======================================================================
ERROR: test4 (__main__.TestEUtilsELinkExamples)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "test_examples.py", line 272, in test4
    related = records.neighbor_links(term = "medline[sb]")
  File "/usr/local/lib/python2.2/site-packages/EUtils/Mixins.py", line 66, 
in neighbor_links
    daterange = daterange)
  File "/usr/local/lib/python2.2/site-packages/EUtils/DBIdsClient.py", 
line 114, in elink
    return self.eutils.elink_using_dbids(
  File "/usr/local/lib/python2.2/site-packages/EUtils/DBIdsClient.py", 
line 124, in _get_dbids
    infile = self.efetch(retmode = "text", rettype = "uilist")
  File "/usr/local/lib/python2.2/site-packages/EUtils/DBIdsClient.py", 
line 164, in efetch
    rettype = rettype)
  File "/usr/local/lib/python2.2/site-packages/EUtils/ThinClient.py", line 
988, in efetch_using_dbids
    query = {"id": id_string,
  File "/usr/local/lib/python2.2/site-packages/EUtils/ThinClient.py", line 
648, in _get
    return self.opener.open(url)
  File "support_test.py", line 22, in open
    saved_url, saved_query = self.unpickler.load()
ValueError: too many values to unpack


The only thing the bottom two seem to have in common is the name 'open'.  
Is this some kind of name collision?


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