[BioPython] genbank_format.py fix-up

Jay Hesselberth jhessel@mail.utexas.edu
17 Jul 2002 10:19:51 -0500


I've been parsing viral genbank files, and there's an extra field in the
LOCUS line that screws up the alpha-4 genbank parser.  Don't know if
this is already in CVS.  Here's the diff:

================================================================
85,87d84
< valid_nucleic_acid_types = ["linear", "circular"]
< nucleic_acid_types = map(Martel.Str, valid_nucleic_acid_types)
< 
92c89
<                                       
Martel.Alt(*nucleic_acid_types)))
---
>                                        Martel.Str("circular")))
=================================================================

Enjoy,

Jay


-- 
________________________________________________
Jay Hesselberth          jhessel@mail.utexas.edu

University of Texas      (512) 471-6445
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