[Biopython-dev] Biopython 1.70 plans

Peter Cock p.j.a.cock at googlemail.com
Fri Jun 23 14:22:53 UTC 2017


On Wed, Jun 21, 2017 at 5:50 PM, Peter Cock <p.j.a.cock at googlemail.com> wrote:
> Hello all,
>
> I'd like to get Biopython 1.70 out soon (maybe even this week),
> so that we can cover this in the project update talk at BOSC
> next month.
>
> This will include the new logo from Patrick:
>
> https://github.com/biopython/biopython/pull/1285

Done.

> I would also like to try this using setuptools only, dropping
> our use of the legacy distutils process:
>
> https://github.com/biopython/biopython/issues/1183

Done, thanks for looking at this Brad.

> And, I've almost got the test suite running and passing on
> the AppVeyor Windows continuous integration platform:
>
> https://github.com/biopython/biopython/issues/1257

Also done.

> Otherwise, I don't think there is anything worth delaying the
> release for.

We could include deprecating Bio.NeutralNetwork and Bio.GA
as well:

https://github.com/biopython/biopython/pull/1292

http://mailman.open-bio.org/pipermail/biopython-dev/2017-June/021780.html
http://mailman.open-bio.org/pipermail/biopython-dev/2017-June/021783.html

> However, there are lots of other pull requests close to being
> ready, so if there is something you think should be included
> please help by reviewing the pull request, or asking about it
> here.

Nothing else?

Peter


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