[Biopython-dev] [Bug 2866] SQLite support for BioSQL

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http://bugzilla.open-bio.org/show_bug.cgi?id=2866





------- Comment #11 from biopython-bugzilla at maubp.freeserve.co.uk  2009-12-10 07:52 EST -------
(In reply to comment #10)
> Thanks Peter. All of the tests will run on SQLite provided sqlite3 is
> installed, so there is no need to split them. I enabled SQLite by default, so
> they will run automatically if a user has sqlite3 and fail gracefully with a
> dependency error if not.

That's great as is. I was thinking about something more: What I meant was, I
want to be able to run all the tests on SQLite (by default) AND on another back
end (e.g. MySQL) if the user has configured it. Otherwise we (as developers)
have to manually switch the BioSQL settings and rerun the BioSQL unit tests.

I will be able to test the effect of your changes on MySQL, hopefully Cymon
can do this on PostgreSQL - not that I anticipate and regressions, but best
to be sure ;)

Peter


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