[Bioperl-pipeline] rerunning an analysis
Shawn Hoon
shawnh at fugu-sg.org
Tue Mar 4 08:18:59 EST 2003
Hi Jeremy,
there is no support for that currently. The rules for the job
management are
still quite rudimentary in this sense. Do you have a specific use case
for such a
pipeline? It is easier to implement if one wants to run something a
fixed number of times.
However to run something until an arbitrary condition will need more
thought. Perhaps
you could elaborate further?
shawn
On Monday, March 3, 2003, at 03:07 PM, jeremyp at sgx3.bmb.uga.edu wrote:
> Hi,
>
> I was wondering if there is any support in bioperl pipeline for
> rerunning
> an analysis. That is, I have a specific analysis that is generating
> output
> that may need to go through that type of analysis again (perhaps an
> arbitrary number of times). Is there a way to do this if I don't know
> how
> many times the analysis may need to be run before the pipeline is run?
>
> Thanks, Jeremy
>
>
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