[Bioperl-pipeline] Problems of installing BioPile
Jia, Shuang
SJia@mail.brc.mcw.edu
Thu, 12 Dec 2002 12:17:40 -0600
Dear Fugu Informatics group in Singapore:
I try to install the BioPipe in our Red Hat Lunix system. Now I am
experiencing some problem. Could you help me with them:
* When I did the 'perl Makefile.PL' of the bioperl-db, I got the
following:
[root@jupiter bioperl-db]# perl Makefile.PL
Generated sub tests. go make show_tests to see available subtests
Checking if your kit is complete...
Warning: the following files are missing in your kit:
t/data/LL-sample.seq
t/locuslink.t
Please inform the author.
Writing Makefile for Bio
Did I need this two files? Where I can get them? I try to update
bioperl-db on your cvs site, they are still not there.
* When I did the 'perl Makefile.PL' of the bioperl-pipeline, I got the
following:
[root@jupiter bioperl-pipeline]# perl Makefile.PL
WARNING! The bioperl-run package is not installed on this computer.
It is necessary for the bioperl-pipeline to run all programs within the
pipeline framework
INSTALLATION FAILED. The necessary packages/modules detailed above
are not present, thus installation cannot proceed. Please install the
missing packages/modules and retry
I already make install the bioper-run, how could I let it runing?
Thanks very much.
Shuang