[Bioperl-l] About to tag the last RC...

David.Messina at sbc.su.se David.Messina at sbc.su.se
Tue Jan 20 17:11:04 UTC 2009


Hey guys, I'm away this week skiing, so I'll test it when I return and
report back to you.

Dave


On 1/20/09, Chris Fields <cjfields at illinois.edu> wrote:
> Couldn't repeat it.  Note that the test passes for some odd reason,
> shouldn't it fail?
>
> Dave does this still show up?
>
> chris
>
> On Jan 19, 2009, at 3:11 PM, Brian Osborne wrote:
>
>> Chris & Dave,
>>
>> Just a note to say that I haven't seen this "Couldn't call
>> new_from_registry() on [Bio::DB::Flat]" message in my tests of RC3,
>> with or without networking. This was Dave testing RC2. Did you fix
>> this in RC3 Chris?
>>
>> Brian O.
>>
>>
>> On Jan 14, 2009, at 4:53 AM, Dave Messina wrote:
>>
>>> t/LocalDB/Registry.............................1/14
>>> --------------------- WARNING ---------------------
>>> MSG: Couldn't call new_from_registry() on [Bio::DB::Flat]
>>>
>>> ------------- EXCEPTION: Bio::Root::Exception -------------
>>> MSG: you must specify an indexing scheme
>>> STACK: Error::throw
>>> STACK: Bio::Root::Root::throw Bio/Root/Root.pm:357
>>> STACK: Bio::DB::Flat::new Bio/DB/Flat.pm:160
>>> STACK: Bio::DB::Flat::new_from_registry Bio/DB/Flat.pm:252
>>> STACK: Bio::DB::Registry::_load_registry Bio/DB/Registry.pm:164
>>> STACK: Bio::DB::Registry::new Bio/DB/Registry.pm:95
>>> STACK: t/LocalDB/Registry.t:51
>>> -----------------------------------------------------------
>>>
>>> ---------------------------------------------------
>>> t/LocalDB/Registry.............................ok
>>
>
>



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