[Bioperl-l] About to tag the last RC...

Chris Fields cjfields at illinois.edu
Mon Jan 19 23:21:09 UTC 2009


Couldn't repeat it.  Note that the test passes for some odd reason,  
shouldn't it fail?

Dave does this still show up?

chris

On Jan 19, 2009, at 3:11 PM, Brian Osborne wrote:

> Chris & Dave,
>
> Just a note to say that I haven't seen this "Couldn't call  
> new_from_registry() on [Bio::DB::Flat]" message in my tests of RC3,  
> with or without networking. This was Dave testing RC2. Did you fix  
> this in RC3 Chris?
>
> Brian O.
>
>
> On Jan 14, 2009, at 4:53 AM, Dave Messina wrote:
>
>> t/LocalDB/Registry.............................1/14
>> --------------------- WARNING ---------------------
>> MSG: Couldn't call new_from_registry() on [Bio::DB::Flat]
>>
>> ------------- EXCEPTION: Bio::Root::Exception -------------
>> MSG: you must specify an indexing scheme
>> STACK: Error::throw
>> STACK: Bio::Root::Root::throw Bio/Root/Root.pm:357
>> STACK: Bio::DB::Flat::new Bio/DB/Flat.pm:160
>> STACK: Bio::DB::Flat::new_from_registry Bio/DB/Flat.pm:252
>> STACK: Bio::DB::Registry::_load_registry Bio/DB/Registry.pm:164
>> STACK: Bio::DB::Registry::new Bio/DB/Registry.pm:95
>> STACK: t/LocalDB/Registry.t:51
>> -----------------------------------------------------------
>>
>> ---------------------------------------------------
>> t/LocalDB/Registry.............................ok
>




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