[Bioperl-l] amino acid index

Navdeep Jaitly ndjaitly@hotmail.com
Thu, 04 Jul 2002 04:53:46 -0400


I was planning to write some for my use, if there wasn't an implementation 
already. I could make it available / submit changes to the bioperl cvs.
I think Bio::Tools::AAIndex would be a good place to provide AAIndex access. 
Comments/suggestions ?
Deep



>From: Heikki Lehvaslaiho <heikki@ebi.ac.uk>
>To: Navdeep Jaitly <ndjaitly@hotmail.com>
>CC: bioperl-l@bioperl.org
>Subject: Re: [Bioperl-l] amino acid index
>Date: Thu, 04 Jul 2002 09:16:12 +0100
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>There isn't. Are planning to write something?
>
>	-Heikki
>
>
>
>Navdeep Jaitly wrote:
>>Hi!
>>Is there any on-going work that would allow users to calculate AAIndex 
>>values for a peptide by specifying an accession number for an AAIndex ?
>>Cheers!
>>Deep
>>
>>
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>--
>______ _/      _/_____________________________________________________
>       _/      _/                      http://www.ebi.ac.uk/mutations/
>      _/  _/  _/  Heikki Lehvaslaiho          heikki@ebi.ac.uk
>     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
>    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
>   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
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