[Open-bio-l] More FASTQ examples for cross project testing

[Chris Fields]

On Sep 1, 2009, at 11:15 AM, Peter wrote:

> On Tue, Sep 1, 2009 at 5:03 PM, Chris Fields<cjfields at illinois.edu>  
> wrote:
>>
>> On Sep 1, 2009, at 10:28 AM, Peter wrote:
>>
>>> ...
>>> Would it suffice to agree that all the OBF projects will read these
>>> error_*.fastq files and either raise an exception (abort), or at  
>>> least
>>> issue a warning?
>>
>> I would rather throw on those; I can easily change that behavior to  
>> do
>> whatever the consensus is.
>>
>> chris
>
> If you (Chris) would prefer BioPerl to throw an exception and abort on
> these error cases, I would support that 100%. :)
>
> Peter

Well, if we're going through the trouble of detecting bad data, might  
as well let the user know in a meaningful way ;>

chris