[EMBOSS] DNA sequence as input argument
    Sigve Nakken 
    sigve.nakken at medisin.uio.no
       
    Fri Feb 11 10:54:44 UTC 2011
    
    
  
Hi,
Is there any way in which one can read a DNA sequence directly from the 
command line (that is
as a string input argument) rather than from a file? I am especially 
interested in finding repeats,
inverted repeats etc. (e.g. 'einverted', 'etandem' EMBOSS apps). Instead 
of creating a FASTA file
for each query sequene, I would like to read the sequence directly from 
the command line. Is this possible?
Kind regards,
Sigve
    
    
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