[EMBOSS] How to specify the number of partial digestion using DIGEST

David Zhao wzhao6898 at gmail.com
Fri Jul 31 12:21:06 EDT 2009


Hi there,

I'm trying to use DIGEST to generate virtual tryptic digest for a list of 
proteins, where I'd like to get 2 or 3 miscleavage digestion. I know -overlap 
returns 1 miscleavage, and -allpartials returns all the combinations 
and result in a huge file, is there a way I can specify how many miscleavage I 
need?
Thanks,

David Zhao



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