[EMBOSS] useful hits about install EMBOSS-3.0.0 under cygwin
zhendong shaw
xiaozhendong at gmail.com
Mon May 1 12:43:14 EDT 2006
Dear guys,
When installed the EMBOSS-3.0.0 under cygwin, I encountered some
problems. By using google searching the answers, all the problems solved. I
found some guys in the mailing list asked some questions the same as I
encoutered. So I list the hits about install EMBOSS-3.0.0 under cygwin,
maybe they will be useful for some people.
1. Read the HowTo by Olivier Martin
http://emboss.sourceforge.net/download/cygwin.html
2. If you find some compile error about "d_ino"(maybe the most popular
problem ^_^), you could try as follow:
*mv ajax/ajfile.c ajax/ajfile.bak
mv nucleus/embdbi.c nucleus/embdbi.bak
perl -pe 's/d_ino/__invalid_d_ino/g' ajax/ajfile.bak > ajax/ajfile.c
perl -pe 's/d_ino/__invalid_d_ino/g' nucleus/embdbi.bak >
nucleus/embdbi.c
*3. Also you may find the "automake version" problem, try:
* aclocal - I m4
autoconf
automake -a
and then make again.
*
Best!
Zhendong Shaw
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