[EMBOSS] Gaps converted to "n's" in showalign consensus

[pmr at ebi.ac.uk]

Hi Phillip,

> It would be great if showalign had a switch that would prevent it from
> converting "-" to "n" in the consensus it generates for an alignment. I
> frequently have long stretches of leading and trailing "n's" caused by
> this behavior. I would like to be able to turn this behavior off in
> consense as well.

That's a bug (as '-' is clearly the consensus).

I will look into it.

Peter