[EMBOSS] Some question

[Dr J.C. Ison]

Dear Balazs

See http://emboss.sourceforge.net/apps/ for application documentation.

transeq       Translates nucleic acid sequences.   (i.e. DNA -> protein)
backtranseq   Back translate a protein sequence    (i.e. protein -> DNA)
coderet       Extract CDS, mRNA and translations from feature tables 

I don't think there is anything to interchange sense/antisense or mRNA / DNA
sequences but something could be written if you let us know exactly what you
need / why you need it.

Cheers

Jon





Kerti Balázs Gábor wrote:
> 
> Hello!
> 
> There is some (elementary) question, because I do not find - maybe I do wrong
> - the solution.
> 
> - how to backtranslate a cds mRNA fragm. to (c)DNA fragm. ?
> - how to generate antisense DNA fragm. from a sens.
> 
> Thank you.
> 
> Balazs
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at emboss.open-bio.org
> http://newportal.open-bio.org/mailman/listinfo/emboss

-- 
Jon C. Ison, PhD
Proteomics Applications Group
MRC Rosalind Franklin Centre for Genomics Research
Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SB, UK
Tel: +44 1223 494500  Fax: +44 1223 494512
E-mail: jison at rfcgr.mrc.ac.uk  Web: http://www.rfcgr.mrc.ac.uk