[EMBOSS] EMBOSS GUI problems

[Peter Rice]

Andrew.Mather at dpi.vic.gov.au wrote:

> Hi Peter,
> 
> Yeah, that's what I figured too, but what's confused me is that it works 
> for some apps, but not others. 
> 
> I guess I've assumed that something like getting the input sequence would 
> be common to all apps but if it's not, that could explain some things.

There are some dependiencies in the inputs for water and needle (both 
sequences must be protein or DNA) so they may have different processing.

But emma has only one sequence input so that does not seem to be the common 
factor.

Luke's address in your mail didn't work for me. I've copied this to another 
address for him (lukem at gene.pbi.nrc.ca).

Peter

> pmr at ebi.ac.uk
> 01/08/05 07:05 PM
> 
>  
>         To:     Andrew.Mather at dpi.vic.gov.au
>         cc:     mcarthy at cs.usask.ca, emboss at emboss.open-bio.org
>         Subject:        Re: [EMBOSS] EMBOSS GUI problems
> 
> 
> Andrew.Mather at dpi.vic.gov.au wrote:
> 
> 
>>Error: Unable to read sequence ''
>>Died: water terminated: Bad value for '-asequence' with -auto defined
>>water exited with status 1...
> 
> 
> This looks like what I would expect if there is no value for -asequence on 
> the 
> command line generated by EMBOSS::GUI.
> 
> Luke ... over to you.
> 
> Peter
> 
> 
> 
>