Extracting protein translation with extractfeat

[Gary Williams, Tel 01223 494522]

Try using 'coderet -nocds -nomrna'.

Gary

Burke Squires wrote:
> 
> Hello,
> 
> I would like to extract the protein translation for genes in a Genbank file.
> I need the name to also be extracted so I must use extractfeat but I am not
> sure what of the myriad of option to put together to get the amino acid
> sequence out with the name. The Example lists a mod_res but nothing else.
> Got any ideas?
> 
> Thanks,
> 
> Burke
> 
> --
> Burke Squires
> Bioinformatics
> MacroGenics, Inc.
> Dallas, TX

-- 
Gary Williams               Tel: +44 1223 494522  Fax: +44 1223 494512
mailto:G.Williams at rfcgr.mrc.ac.uk          http://www.rfcgr.mrc.ac.uk/
Bioinformatics, MRC RFCGR, Hinxton, Cambridge, CB10 1SB, UK