ESIM4, was: Re: EMBOSS 2.4.0 available

David Mathog mathog at mendel.bio.caltech.edu
Tue May 14 16:22:59 UTC 2002


> EMBOSS 2.4.0 has so many changes over 2.3.1 ...

esim4, the EMBASSY variant of sim4 (compare mRNA to genomic
dna quickly and find alignments) is (still) available from:

  ftp://saf.bio.caltech.edu/pub/software/molbio/ESIM4-1.0.2.tar.gz

This built ok on Solaris but Alan tells me it has problems on AIX which
is why
it hasn't made it into the main EMBASSY distribution site yet.  Those
of you not on AIX might want to install it anyway since it's very much
faster
than est2genome.

Regards,

David Mathog
mathog at caltech.edu
Manager, Sequence Analysis Facility, Biology Division, Caltech




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